Information for 4-ACTCCAKGCCTGA (Motif 14)

C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G C T A G A G T C G T A C A C G T A C T G A C T G C G T A A C T G A C G T
p-value:1e-11
log p-value:-2.555e+01
Information Content per bp:1.936
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.2 +/- 22.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ACTCCAKGCCTGA
---CNAGGCCT--
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ACTCCAKGCCTGA
---CTAGGCCT--
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACTCCAKGCCTGA
GGGGCCGAGGCCTG-
 A C G T A C G T C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Pax6/MA0069.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACTCCAKGCCTGA---
--TTCACGCATGAGTT
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTCCAKGCCTGA----
--GTCATGCHTGRCTGS
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---ACTCCAKGCCTGA
RSCACTYRAG------
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:ACTCCAKGCCTGA
-NNACTTGCCTT-
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:ACTCCAKGCCTGA--
-----ATGCCAGACN
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---ACTCCAKGCCTGA
NSCACTYVAV------
 A C G T A C G T A C G T C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:ACTCCAKGCCTGA
-NTCAAGGTCA--
 C G T A A G T C A C G T A G T C G T A C C G T A C A T G A C T G A G T C A G T C A C G T A C T G C G T A
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T