Information for 9-AAGACAAGGAGAATGG (Motif 33)

C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A A C G T A C G T A T G C A C G T A G T C G T A C A C G T A C G T A C T G A C G T A G T C A G C T A G C T
p-value:1e-6
log p-value:-1.406e+01
Information Content per bp:1.911
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.39%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 18.5bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
AAAACAATGG------
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:2
Score:0.57
Offset:7
Orientation:forward strand
Alignment:AAGACAAGGAGAATGG-----
-------GGAGAAAGGTGCGA
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:AAGACAAGGAGAATGG-
-------RAACAATGGN
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox17/MA0078.1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
--GACAATGNN-----
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
---ACAAAG-------
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
------VRAACAATGG
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG-
-------GAACAATGGN
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
VRRACAAWGG------
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AAGACAAGGAGAATGG
ANAGATAAGAA------
 A C G T C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:AAGACAAGGAGAATGG
--------AACAAAGG
 C T G A C T G A A C T G C G T A A G T C T C G A C G T A A C T G A C T G C G T A A T C G G T C A C G T A A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G