Information for 2-YYRAGSGCGGMGCMWG (Motif 3)

A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
Reverse Opposite:
A G T C C G T A A C G T A C T G A G T C A C G T A G T C A G T C A T C G A G T C A T C G A G T C A C G T A G T C C T A G C T G A
p-value:1e-11
log p-value:-2.697e+01
Information Content per bp:1.824
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 20.0bp
Average Position of motif in Background35.4 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:YYRAGSGCGGMGCMWG
-RGKGGGCGGAGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
--GGGGGCGGGGCC--
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
NNVDGGGYGGGGCYN-
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
-------CGGAGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YYRAGSGCGGMGCMWG
-AGGGGGCGGGGCTG-
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

SP1/MA0079.3/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
--GGGGGCGGGGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
---GGGGNGGGGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:YYRAGSGCGGMGCMWG
---TGGGTGGGGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:YYRAGSGCGGMGCMWG
NNAGGGGCGGGGTNNA
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:YYRAGSGCGGMGCMWG
---DGGGYGKGGC---
 A G C T G A T C C T A G C G T A A C T G T A C G A C T G A T G C A C T G A C T G G T C A A C T G A G T C G T C A C G A T A C T G
A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C A C G T A C G T A C G T