Information for 16-TGCCTACWCTGTC (Motif 29)

A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
Reverse Opposite:
A T C G C T G A T A G C T G C A T C A G C G A T T A C G C A G T C T G A C A T G T A C G A T G C C T G A
p-value:1e-7
log p-value:-1.689e+01
Information Content per bp:1.666
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif431.9
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets56.0 +/- 27.1bp
Average Position of motif in Background52.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACWCTGTC
ATGCCAACC-----
 A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGCCTACWCTGTC--------
-GCCTCCTCCMTCWGACTGKS
 A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACWCTGTC
ATGCCCACC-----
 A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TGCCTACWCTGTC
NNACTTGCCTT-------
 A C G T A C G T A C G T A C G T A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TGCCTACWCTGTC
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCTACWCTGTC--
TGCCTGCGYCMCCTT
 A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:7
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCCTACWCTGTC-
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:TGCCTACWCTGTC--
--------NTGTCAN
 A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGCCTACWCTGTC
CTGCCCGCA-----
 A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGCCTACWCTGTC
GGTGCCAAGT-----
 A C G T A C G T A G C T A T C G A T G C G T A C G A C T G T C A A T G C G C T A A G T C A C G T A T C G G A C T T A G C
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T