Information for 6-GGCTTCCATGKGGTCT (Motif 18)

A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
Reverse Opposite:
C T G A A C T G G C T A A G T C G T A C G T C A T A G C C G T A A C G T A C T G C T A G T C G A C T G A T A C G T G A C A T G C
p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.697
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif73.7
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets39.8 +/- 20.2bp
Average Position of motif in Background47.5 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGCTTCCATGKGGTCT
---TCCCCTGGGGAC-
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T A C G T A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GGCTTCCATGKGGTCT
-GTTGCCATGGNAAC-
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GGCTTCCATGKGGTCT
-GCTTCC---------
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCTTCCATGKGGTCT
KGTTGCCATGGCAAC-
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C T G C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GGCTTCCATGKGGTCT
CGGTTGCCATGGCAAC-
 A C G T A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C A C G T

EBF1/MA0154.3/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GGCTTCCATGKGGTCT
--ANTCCCTNGGGAAT
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

Myc/MA0147.2/Jaspar

Match Rank:7
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGCTTCCATGKGGTCT
-----CCATGTGCTT-
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GGCTTCCATGKGGTCT
----TCCCNNGGGACN
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T A C G T A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGCTTCCATGKGGTCT
---TGCCCTGAGGGCA
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GGCTTCCATGKGGTCT
---TGCCCTGAGGGCA
 A T C G A C T G A G T C A G C T A G C T A G T C G T A C T G C A C G A T A T C G C A G T A C T G C T A G C G A T A G T C G A C T
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A