| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer | 1e-7 | -1.827e+01 | 0.0000 | 36.0 | 5.42% | 831.1 | 1.81% | motif file (matrix) |
svg |
| 2 |
| E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.476e+01 | 0.0001 | 54.0 | 8.13% | 1774.2 | 3.87% | motif file (matrix) |
svg |
| 3 |
| E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer | 1e-6 | -1.473e+01 | 0.0001 | 51.0 | 7.68% | 1634.4 | 3.56% | motif file (matrix) |
svg |
| 4 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.167e+01 | 0.0008 | 37.0 | 5.57% | 1152.0 | 2.51% | motif file (matrix) |
svg |
| 5 |
| E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer | 1e-4 | -1.135e+01 | 0.0009 | 55.0 | 8.28% | 2048.7 | 4.46% | motif file (matrix) |
svg |
| 6 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.106e+01 | 0.0010 | 55.0 | 8.28% | 2070.8 | 4.51% | motif file (matrix) |
svg |
| 7 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-4 | -1.052e+01 | 0.0014 | 51.0 | 7.68% | 1906.8 | 4.15% | motif file (matrix) |
svg |
| 8 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.047e+01 | 0.0014 | 50.0 | 7.53% | 1859.5 | 4.05% | motif file (matrix) |
svg |
| 9 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-4 | -1.043e+01 | 0.0014 | 104.0 | 15.66% | 4830.4 | 10.52% | motif file (matrix) |
svg |
| 10 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-4 | -1.036e+01 | 0.0014 | 42.0 | 6.33% | 1467.5 | 3.20% | motif file (matrix) |
svg |
| 11 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -1.020e+01 | 0.0014 | 61.0 | 9.19% | 2454.2 | 5.35% | motif file (matrix) |
svg |
| 12 |
| E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer | 1e-4 | -1.019e+01 | 0.0014 | 17.0 | 2.56% | 367.3 | 0.80% | motif file (matrix) |
svg |
| 13 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-3 | -8.316e+00 | 0.0068 | 110.0 | 16.57% | 5465.6 | 11.91% | motif file (matrix) |
svg |
| 14 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.662e+00 | 0.0122 | 44.0 | 6.63% | 1773.1 | 3.86% | motif file (matrix) |
svg |
| 15 |
| Sp1(Zf)/Promoter/Homer | 1e-3 | -7.035e+00 | 0.0214 | 28.0 | 4.22% | 999.5 | 2.18% | motif file (matrix) |
svg |
| 16 |
| CRE(bZIP)/Promoter/Homer | 1e-2 | -6.470e+00 | 0.0352 | 21.0 | 3.16% | 695.1 | 1.51% | motif file (matrix) |
svg |
| 17 |
| E2F(E2F)/Hela-CellCycle-Expression/Homer | 1e-2 | -6.456e+00 | 0.0352 | 8.0 | 1.20% | 147.8 | 0.32% | motif file (matrix) |
svg |
| 18 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.838e+00 | 0.0589 | 22.0 | 3.31% | 783.7 | 1.71% | motif file (matrix) |
svg |
| 19 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.806e+00 | 0.0589 | 50.0 | 7.53% | 2292.2 | 4.99% | motif file (matrix) |
svg |
| 20 |
| ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -5.640e+00 | 0.0646 | 2.0 | 0.30% | 6.6 | 0.01% | motif file (matrix) |
svg |
| 21 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.107e+00 | 0.1050 | 172.0 | 25.90% | 9978.3 | 21.74% | motif file (matrix) |
svg |
| 22 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.066e+00 | 0.1050 | 60.0 | 9.04% | 2970.2 | 6.47% | motif file (matrix) |
svg |
| 23 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -4.704e+00 | 0.1433 | 74.0 | 11.14% | 3869.7 | 8.43% | motif file (matrix) |
svg |
| 24 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-2 | -4.696e+00 | 0.1433 | 136.0 | 20.48% | 7757.5 | 16.90% | motif file (matrix) |
svg |
| 25 |
| E-box(bHLH)/Promoter/Homer | 1e-2 | -4.617e+00 | 0.1439 | 10.0 | 1.51% | 286.1 | 0.62% | motif file (matrix) |
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