Information for 2-TGGGCCGTAGGTT (Motif 6)

A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T
Reverse Opposite:
G C T A C G T A A G T C A G T C A C G T C G T A A G T C A C T G A T C G A G T C A G T C A G T C C G T A
p-value:1e-11
log p-value:-2.599e+01
Information Content per bp:1.947
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.4 +/- 23.7bp
Average Position of motif in Background67.3 +/- 11.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCCGTAGGTT-
NNNTNGGGCGTATNNTN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T

PB0161.1_Rxra_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGGGCCGTAGGTT-----
--TCGCGAAGGTTGTACT
 A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGGCCGTAGGTT-
TGGGGCAAAGGTCA
 A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGGCCGTAGGTT
GTGGGCCCCA----
 A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T
T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A A C G T A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGGGCCGTAGGTT-
GTAGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

SP4/MA0685.1/Jaspar

Match Rank:6
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---TGGGCCGTAGGTT-
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGGGCCGTAGGTT-
CACGGCAGTTGGTNN
 A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TGGGCCGTAGGTT-
TAGGGCAAAGGTCA
 A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

PB0094.1_Zfp128_1/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGGGCCGTAGGTT--
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:TGGGCCGTAGGTT
--GGCVGTTR---
 A C G T A C T G A C T G A C T G A T G C A G T C A C T G A C G T C G T A A C T G A C T G A C G T C A G T
A C G T A C G T C T A G C T A G A G T C T C A G A C T G A C G T A C G T C T G A A C G T A C G T A C G T