Information for 23-AGCGCCTCCTCCC (Motif 50)

C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
Reverse Opposite:
A C T G C T A G A C T G C G T A A C T G A C T G G T C A C T A G A C T G G T A C A C T G A G T C A C G T
p-value:1e-4
log p-value:-1.067e+01
Information Content per bp:1.886
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif11.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.1 +/- 22.2bp
Average Position of motif in Background61.1 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGCGCCTCCTCCC
-GCCCCGCCCCC-
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGCGCCTCCTCCC
NAGCCCCGCCCCCN
 A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGCGCCTCCTCCC---
-GCCCCGCCCCCTCCC
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C A C G T A C G T A C G T
A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCGCCTCCTCCC
-GCTCGGSCTC--
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGCGCCTCCTCCC
---CNGTCCTCCC
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGCGCCTCCTCCC
-GCTCCGCCCMCY
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Sp1(Zf)/Promoter/Homer

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AGCGCCTCCTCCC
GGCCCCGCCCCC-
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:AGCGCCTCCTCCC
--CACTTCCTCT-
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C
A C G T A C G T A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGCGCCTCCTCCC----------
---GCCTCCTCCMTCWGACTGKS
 C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCGCCTCCTCCC----
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T A C G T C G T A A C T G A G T C A C T G A G T C A G T C A C G T A G T C A G T C A C G T A G T C G A T C A G T C A C G T A C G T A C G T A C G T
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G