Information for 20-TCAAGGCCTTGAA (Motif 47)

C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
Reverse Opposite:
G C A T A G C T A G T C G C T A C G T A A C T G C A T G A G T C G A T C C G A T C A G T T A C G G C T A
p-value:1e-5
log p-value:-1.375e+01
Information Content per bp:1.655
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.41%
Number of Background Sequences with motif247.6
Percentage of Background Sequences with motif0.54%
Average Position of motif in Targets47.3 +/- 27.0bp
Average Position of motif in Background50.1 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA
---TGACCTTGAN
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA---
-GCTGACCTTGAACTN
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrra/MA0592.2/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA
--ATGACCTTGAA
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A C G T C G T A A G C T T A C G T G C A T G A C T G A C A G C T A G C T A T C G C T G A T G C A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA
---TGACCTTGAV
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA
-BNTGDCCTTG--
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCAAGGCCTTGAA
---AGGCCTNG--
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCAAGGCCTTGAA
---AGGCCTAG--
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A
A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCAAGGCCTTGAA--
NNNNATGACCTTGANTN
 A C G T A C G T C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA--
---TGACCTTGACCT
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:TCAAGGCCTTGAA--
---TGACCTTGACCT
 C G A T A T G C G C T A C G T A C A T G A C T G G A T C G T A C G C A T C G A T A C T G T C G A C G T A A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T