Information for 17-CGGGACACCACGC (Motif 42)

T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C
Reverse Opposite:
T C A G T A G C A C T G A C G T A C T G T C A G C G A T A C T G A G C T A G T C A G T C A G T C A T C G
p-value:1e-6
log p-value:-1.611e+01
Information Content per bp:1.661
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif908.4
Percentage of Background Sequences with motif1.98%
Average Position of motif in Targets50.7 +/- 23.6bp
Average Position of motif in Background48.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:CGGGACACCACGC----
---GACCCCCCGCGAAG
 T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

PH0164.1_Six4/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGGACACCACGC-
ATAAATGACACCTATCA
 A C G T A C G T A C G T T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

ZIC3/MA0697.1/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGGGACACCACGC-----
---GACCCCCCGCTGCGC
 T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGGGACACCACGC----
---GACCCCCCGCTGTG
 T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

ZIC4/MA0751.1/Jaspar

Match Rank:5
Score:0.62
Offset:3
Orientation:forward strand
Alignment:CGGGACACCACGC-----
---GACCCCCCGCTGTGC
 T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CGGGACACCACGC--
TATCGACCCCCCACAG
 A C G T T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.62
Offset:8
Orientation:reverse strand
Alignment:CGGGACACCACGC-
--------CACGCA
 T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGGACACCACGC-
NNCNTGACCCCGCTCT
 A C G T A C G T T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGGACACCACGC--
TACGAGACTCCTCTAAC
 A C G T A C G T T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGGACACCACGC
CGGTGACGTCAC--
 A C G T T A G C T C A G T C A G A C T G C T G A A G T C G C T A A G T C A G T C T G C A T G A C A T C G A G T C
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T