Information for 23-TGWSCWGCAGGGWTTG (Motif 41)

A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
Reverse Opposite:
A G T C C G T A C T G A C G A T A G T C A G T C A G T C A G C T A C T G A G T C C G A T A C T G A T G C C G A T A T G C G T C A
p-value:1e-7
log p-value:-1.634e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets41.2 +/- 21.3bp
Average Position of motif in Background37.8 +/- 20.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:TGWSCWGCAGGGWTTG
------GCAGTGATTT
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TGWSCWGCAGGGWTTG
-----TGCTGTGATTT
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T A C G T A C G T A C G T A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGWSCWGCAGGGWTTG
--CACAGCAGGGGG--
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGWSCWGCAGGGWTTG
-DCTCAGCAGG-----
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TGWSCWGCAGGGWTTG
-DCHCAGCAGGRGGCC
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGWSCWGCAGGGWTTG
CCACACAGCAGGAGA--
 A C G T A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGWSCWGCAGGGWTTG
CCACACAGCAGGAGA--
 A C G T A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:TGWSCWGCAGGGWTTG-
-------CNGTGATTTN
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGWSCWGCAGGGWTTG
GAGCACAGCAGGACA--
 A C G T A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:forward strand
Alignment:TGWSCWGCAGGGWTTG
--ANCAGCTG------
 A C G T A T C G C G T A A T C G A G T C C G T A A C T G A G T C C T G A A C T G A C T G A C T G C G T A A G C T A C G T C T A G
A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T