Information for 16-AAGAGSGCAGATT (Motif 38)

G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
Reverse Opposite:
G T C A C G T A A C G T A T G C A G C T A C T G G T A C A T C G T A G C G A C T A T G C C G A T A C G T
p-value:1e-7
log p-value:-1.798e+01
Information Content per bp:1.712
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif91.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets43.1 +/- 26.2bp
Average Position of motif in Background51.9 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAGAGSGCAGATT
GGGRAARRGRMCAGMTG
 A C G T A C G T A C G T A C G T G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AAGAGSGCAGATT------
--AAGGCCAGATGGTCCGG
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

YY1(Zf)/Promoter/Homer

Match Rank:3
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAGAGSGCAGATT
CAAGATGGCGGC--
 A C G T G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAGAGSGCAGATT-
----GCAGTGATTT
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AAGAGSGCAGATT
CAAAGGTCAG---
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:AAGAGSGCAGATT--
-----AACAGATGGT
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AAGAGSGCAGATT
-AGRGGTCA----
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AAGAGSGCAGATT
CAAGATGGCGGC--
 A C G T G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AAGAGSGCAGATT--
---NNVVCAGCTGBN
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAGAGSGCAGATT
-TRAGGTCA----
 G T C A C G T A A T C G C G T A A C T G A T G C C A T G T A G C C T G A A T C G G T C A G C A T A C G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T