Information for 21-TCCCAGTCACATSWGG (Motif 32)

A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C C G A T A T G C T G C A A C G T A T C G C G A T A C T G G C T A A T G C C G A T A C T G C T A G T C A G T G C A
p-value:1e-8
log p-value:-1.943e+01
Information Content per bp:1.719
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets50.1 +/- 22.5bp
Average Position of motif in Background50.0 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCCCAGTCACATSWGG
TGCCCAGNHW-------
 A C G T A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCCAGTCACATSWGG
--CCAGACAG------
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCCCAGTCACATSWGG
CAAATCCAGACATCACA--
 A C G T A C G T A C G T A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCCCAGTCACATSWGG
----GGTCACATGAC-
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCCCAGTCACATSWGG
--CCAGACRSVB----
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:6
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCCCAGTCACATSWGG
NNAGTCCCACTCNNNN----
 A C G T A C G T A C G T A C G T A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A A C G T A C G T A C G T A C G T

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCCCAGTCACATSWGG
-----GTCACATGAY-
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TCCCAGTCACATSWGG
--BCAGACWA------
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:TCCCAGTCACATSWGG---
----GGTCANYTGAGGWCA
 A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTCACATSWGG
SCTGTCAVTCAV------
 A C G T A C G T A C G T A G T C G A T C A G T C C G T A A T C G C A G T A G T C C G T A A T G C G T C A A C G T A T C G C G T A C T A G A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T A C G T A C G T A C G T A C G T