Information for 12-AGGTTCAAGGGAA (Motif 27)

C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
Reverse Opposite:
A C G T A C G T A G T C A G T C A G T C C G A T A C G T A C T G C G T A C G T A A G T C A G T C A C G T
p-value:1e-8
log p-value:-2.014e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 24.6bp
Average Position of motif in Background39.8 +/- 9.7bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:AGGTTCAAGGGAA
-AGGTCAAGGTCA
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGGTTCAAGGGAA
-AGGTCAAGGTCA
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGGTTCAAGGGAA--
AAGTTCAAGGTCAGC
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGGTTCAAGGGAA
---TTCTNMGGAA
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGGTTCAAGGGAA
-ANTTCTNNAGAA
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
A C G T C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGTTCAAGGGAA--
TATAGATCAAAGGAAAA
 A C G T A C G T C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGGTTCAAGGGAA-
---TTCAAGGTCAT
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A A C G T
A C G T A C G T A C G T A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTTCAAGGGAA
AAAGATCAAAGGAA
 A C G T C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Stat6/MA0520.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGTTCAAGGGAA---
-ANTTCTCAGGAANNN
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A A C G T A C G T A C G T
A C G T C T G A A C G T A G C T A C G T G T A C G A C T A T G C G C T A C T A G C A T G C G T A C G T A T C G A G C A T T A C G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AGGTTCAAGGGAA
---NTCAAGGTCA
 C G T A A C T G A C T G A C G T A C G T G T A C C G T A C G T A C T A G A C T G A C T G G T C A C G T A
A C G T A C G T A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A