Information for 10-TGTCTATGTGTHTCTC (Motif 15)

A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
Reverse Opposite:
A C T G C T G A C T A G C G T A C G A T C T G A A G T C C G T A G A T C G C T A C G A T C G T A A C T G T G C A A T G C C T G A
p-value:1e-10
log p-value:-2.375e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.3 +/- 24.1bp
Average Position of motif in Background41.7 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TGTCTATGTGTHTCTC-
------AATGTATCAAT
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TGTCTATGTGTHTCTC
--ACTTTCACTTTC--
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
A C G T A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TGTCTATGTGTHTCTC
ANTCCTTTGTCTNNNN-
 A C G T A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:TGTCTATGTGTHTCTC----
--------TGTCTGDCACCT
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.48
Offset:7
Orientation:forward strand
Alignment:TGTCTATGTGTHTCTC----
-------CTGTCTGTCACCT
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.48
Offset:2
Orientation:forward strand
Alignment:TGTCTATGTGTHTCTC
--AGTTTCAGTTTC--
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
A C G T A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:TGTCTATGTGTHTCTC-----
----NTNNCGTATCCAAGTNN
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

IRF1/MA0050.2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--TGTCTATGTGTHTCTC---
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.46
Offset:2
Orientation:reverse strand
Alignment:TGTCTATGTGTHTCTC
--RSTTTCRSTTTC--
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
A C G T A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:10
Score:0.46
Offset:2
Orientation:forward strand
Alignment:TGTCTATGTGTHTCTC
--GCTATTTTTAGC--
 A G C T T A C G A C G T A G T C A C G T C G T A C G A T C T A G C G A T A C T G A G C T G C T A C G A T A G T C G A C T A G T C
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T