Information for 16-CTAAGRKAGC (Motif 35)

T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T G T A C A G C T A G T C A C G T A C G T C G T A A C T G
p-value:1e-6
log p-value:-1.449e+01
Information Content per bp:1.806
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif21.3
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets59.4 +/- 23.3bp
Average Position of motif in Background45.9 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGRKAGC
NNATAAGGNN--
 A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTAAGRKAGC----
NNNTTAGGTAGCNTNT
 A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CTAAGRKAGC-
------CAGCC
 T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:4
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTAAGRKAGC
NVAGATAAGR----
 A C G T A C G T A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTAAGRKAGC
----CGGAGC
 T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

PB0051.1_Osr2_1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAAGRKAGC----
ATGTACAGTAGCAAAG
 A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T A C G T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

YY1/MA0095.2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTAAGRKAGC---
-CAAGATGGCGGC
 T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0126.1_Gata5_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTAAGRKAGC-----
GACAGAGATATCAGTGT
 A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTAAGRKAGC---
-CAAGATGGCGGC
 T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C A C G T A C G T A C G T
A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---CTAAGRKAGC
CAGATAAGGN---
 A C G T A C G T A C G T T A G C C G A T C G T A C G T A A C T G C T G A C A T G G C T A A C T G A G T C
T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A A C G T A C G T A C G T