Information for 16-CTTGAGGTTGCTG (Motif 19)

A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G G A T C C T G A T C G A A T G C G T A C C G A T A G T C C G T A C G T A A C T G
p-value:1e-10
log p-value:-2.511e+01
Information Content per bp:1.838
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 21.6bp
Average Position of motif in Background37.9 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CTTGAGGTTGCTG----
--AGATGCTRCTRCCHT
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTTGAGGTTGCTG
-TTGCGGTTT---
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTTGAGGTTGCTG
TTTGCGGTTT---
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTTGAGGTTGCTG
-CTGTGGTTTN--
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:5
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------CTTGAGGTTGCTG
GCTGACCTTGAACTN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTGAGGTTGCTG
NNTGTGGTTT---
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:9
Orientation:forward strand
Alignment:CTTGAGGTTGCTG--
---------GCTGTG
 A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTTGAGGTTGCTG
GTCTGTGGTTT---
 A C G T A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTTGAGGTTGCTG
NNHTGTGGTTWN--
 A C G T A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----CTTGAGGTTGCTG
TGACCTTGAN-------
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G C G T A A C T G A T C G A G C T A G C T C T A G A G T C A C G T A C T G
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T