Information for 3-AATTGGAAGCCTT (Motif 4)

C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
Reverse Opposite:
C T G A C G T A C T A G A C T G A G T C A C G T A C G T A G T C A G T C C G T A C T G A A G C T A C G T
p-value:1e-10
log p-value:-2.516e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.8 +/- 23.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:AATTGGAAGCCTT
--TTGGCA-----
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AATTGGAAGCCTT
NNTTGGCANN---
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AATTGGAAGCCTT
----NGAAGC---
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T

MSX2/MA0708.1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGAAGCCTT
NTAATTGG-------
 A C G T A C G T C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AATTGGAAGCCTT
-NNTGGAAANN--
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AATTGGAAGCCTT
-NTTGGCANN---
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGAAGCCTT
NTAATTGG-------
 A C G T A C G T C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AATTGGAAGCCTT
NTAATTGN-------
 A C G T A C G T C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A G C T G C A T C T G A C G T A A C G T A G C T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:AATTGGAAGCCTT
AACCGGAAGT---
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T

MF0001.1_ETS_class/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AATTGGAAGCCTT
-ACCGGAAG----
 C G T A C T G A A G C T A C G T A C T G A C T G G T C A C G T A C T A G A G T C A G T C A C G T A G C T
A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T A C G T A C G T