Information for 2-GKGAGKGWSCAGG (Motif 3)

A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A T G C C G A T A T G C G T C A A G T C A C G T A T G C G T C A A G T C
p-value:1e-11
log p-value:-2.612e+01
Information Content per bp:1.839
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.39%
Number of Background Sequences with motif150.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets44.8 +/- 21.6bp
Average Position of motif in Background49.7 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GKGAGKGWSCAGG--
AAGGKGRCGCAGGCA
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GKGAGKGWSCAGG-
TGACANARRCCAGRC
 A C G T A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GKGAGKGWSCAGG-----
--------VCAGGTRDRY
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GKGAGKGWSCAGG----
-NNAGGGACAAGGGCNC
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

POL011.1_XCPE1/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GKGAGKGWSCAGG
GGGCGGGACC---
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GKGAGKGWSCAGG-----
------SDGCAGGTGCNS
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GKGAGKGWSCAGG
-TGAGTCAGCA--
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G
A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GKGAGKGWSCAGG----
-------NNCAGGTGNN
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------GKGAGKGWSCAGG-
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:GKGAGKGWSCAGG----
-------ANCAGGATGT
 A C T G A C G T A T C G C G T A A C T G C A G T A T C G C G T A A T C G A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T