Information for 15-GGGTCACCCTGCT (Motif 22)

A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G G T A C C G T A A C T G A C T G A C T G A C G T A C T G C G T A T A G C A G T C A G T C
p-value:1e-6
log p-value:-1.402e+01
Information Content per bp:1.946
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.0 +/- 24.8bp
Average Position of motif in Background76.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.66
Offset:-6
Orientation:forward strand
Alignment:------GGGTCACCCTGCT
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGTCACCCTGCT--
AGGTCACCCTGACCT
 A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T
C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:GGGTCACCCTGCT---
----CCCCCTGCTGTG
 A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGGTCACCCTGCT
AGGTCA-------
 A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGGTCACCCTGCT
AGRGGTCA-------
 A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGGTCACCCTGCT
NTNNNGGGGTCANGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGGTCACCCTGCT-
NAGGTCACNNTGACC
 A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

PB0157.1_Rara_2/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------GGGTCACCCTGCT
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGGTCACCCTGCT----
--GGCCYCCTGCTGDGH
 A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------GGGTCACCCTGCT
CTCCAGGGGTCAATTGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A G T C A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T A C G T