Information for 1-CAGRGCCCCCAMGGTG (Motif 2)

A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G
Reverse Opposite:
A G T C C T G A A G T C A G T C A C T G A C G T C T A G A T C G C A T G A C T G C T A G A G T C A G C T A T G C A C G T A C T G
p-value:1e-12
log p-value:-2.939e+01
Information Content per bp:1.784
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.5 +/- 22.9bp
Average Position of motif in Background43.2 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Znf423/MA0116.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG--
---GGCACCCAGGGGTGC
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T T C A G A T C G G T A C G T C A A G T C A G T C G A T C C G T A C T A G A C T G A C T G A C T G A C G T A C T G G T A C

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG-
-AGACCCCCCACGAAGC
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T
A C G T G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

PLAG1/MA0163.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG
--GGGGCCCAAGGGGG
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG-
--GACCCCCCGCTGTGC
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAGRGCCCCCAMGGTG--
----CCCCCCCGGGGGNN
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG
--GACCCCCCGCTGTG
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G
A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CAGRGCCCCCAMGGTG--
---ACCCCCCCGGGGGGN
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG-
--GACCCCCCGCTGCGC
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGRGCCCCCAMGGTG--
---NCCCCCCCGGGGGGN
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGRGCCCCCAMGGTG
---TGCCCTGAGGGCA
 A G T C C G T A A T C G C T G A C T A G A G T C G T A C G A T C A T G C G A T C T C G A T G A C A C T G A C T G A G C T A C T G
A C G T A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A