Information for 7-CGCGCAGATAGCG (Motif 13)

A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
Reverse Opposite:
A G T C A C T G A G T C A C G T C G T A A G C T A G T C A C G T A C T G A G T C A C T G A G T C A C T G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.0 +/- 31.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0199.1_Zfp161_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CGCGCAGATAGCG
GCCGCGCAGTGCGT-
 A C G T A C G T A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGCGCAGATAGCG-----
-GCGGCGATATCGCAGCG
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A T G C A T C G T C A G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A T G C T G C A A T C G G A T C C A G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCGCAGATAGCG
--AACAGATGGC-
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCGCAGATAGCG---
NNNTTAGGTAGCNTNT
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G A C G T A C G T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PB0155.1_Osr2_2/Jaspar

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCGCAGATAGCG---
NNTGTAGGTAGCANNT
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CGCGCAGATAGCG
-----AGATAASR
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAGATAGCG---
AAGGCCAGATGGTCCGG
 A C G T A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CGCGCAGATAGCG
--AACAGATGGT-
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
A C G T A C G T T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CGCGCAGATAGCG
-SDGCAGGTGCNS
 A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0161.1_Rxra_2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CGCGCAGATAGCG--
TCGCGAAGGTTGTACT
 A C G T A G T C A C T G A G T C A C T G A G T C C G T A A C T G C T G A A C G T G T C A A C T G A G T C C T A G A C G T A C G T
C A G T T G A C T C A G G T A C T C A G G C T A G C T A C T A G A C T G A C G T A G C T T C A G A G C T C G T A G T A C C A G T