Information for 6-CCTTCACCTGACT (Motif 12)

A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G T A A C T G A C T G A G C T A C T G C T G A C G T A A C T G A C T G
p-value:1e-8
log p-value:-1.948e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.6 +/- 26.7bp
Average Position of motif in Background58.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTTCACCTGACT
-CCTCACCTG---
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCACCTGACT
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCACCTGACT
TGACCTTGACCT----
 A C G T A C G T A C G T A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT-
--GTCACGTGACYV
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T A C G T
A C G T A C G T T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT
--ATCACGTGAC-
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT
--NNCACCTGNN-
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:7
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCTTCACCTGACT--
---TCACGTGACCGG
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G

SREBF2(var.2)/MA0828.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT
--ATCACGTGAC-
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T A C G T T C G A G C A T T A G C C T G A A T G C T A C G G A C T A T C G C G T A A G T C A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT
--GTCACGTGAC-
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T

ID4/MA0824.1/Jaspar

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCTTCACCTGACT
--TACACCTGTC-
 A G T C A G T C A C G T A G C T A G T C C T G A A G T C A G T C A C G T T C A G C G T A A G T C A C G T
A C G T A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T