Information for 12-STCCCCYRGTSKGWST (Motif 32)

T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
Reverse Opposite:
C G T A T A C G G C A T G T A C G T A C A T G C G T C A A G T C A G C T C T A G A C T G A C T G A C T G A C T G C G T A A T C G
p-value:1e-6
log p-value:-1.407e+01
Information Content per bp:1.820
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 25.1bp
Average Position of motif in Background37.7 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:STCCCCYRGTSKGWST
-TCCCCA---------
 T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:STCCCCYRGTSKGWST
CACCCCCGGGGGGG--
 T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-STCCCCYRGTSKGWST
ACCCCCCCGGGGGGN--
 A C G T T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:STCCCCYRGTSKGWST
CCCCCCCGGGGGGGT-
 T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:STCCCCYRGTSKGWST
-CCCCCTGCTGTG---
 T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-STCCCCYRGTSKGWST
GGCCYCCTGCTGDGH--
 A C G T T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---STCCCCYRGTSKGWST
NTCNTCCCCTATNNGNN--
 A C G T A C G T A C G T T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
T G A C C A G T A G T C T A G C A G C T A G T C T A G C G T A C G T A C A G C T C T G A A G C T C A T G A T G C T A C G G T A C G C T A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:0
Orientation:forward strand
Alignment:STCCCCYRGTSKGWST
GTCCCCAGGGGA----
 T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-STCCCCYRGTSKGWST
GACCCCCCGCTGTGC--
 A C G T T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-STCCCCYRGTSKGWST
GACCCCCCGCTGTG---
 A C G T T A G C A C G T A G T C A G T C A G T C A G T C G A T C C T G A A C T G A C G T A T C G A C T G A C T G C G T A A T G C A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T A C G T A C G T