Information for 6-GGGAGCCTTG (Motif 17)

C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
Reverse Opposite:
G T A C C G T A C G T A T A C G A C T G G T A C A C G T A T G C A G T C G A T C
p-value:1e-8
log p-value:-1.958e+01
Information Content per bp:1.800
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.35%
Number of Background Sequences with motif169.7
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets47.8 +/- 27.7bp
Average Position of motif in Background47.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGAGCCTTG
CGGAGC----
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GGGAGCCTTG
--CAGCC---
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-8
Orientation:reverse strand
Alignment:--------GGGAGCCTTG-------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GGGAGCCTTG----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGGAGCCTTG-
AGGVNCCTTTGT
 A C G T C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0203.1_Zfp691_2/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GGGAGCCTTG--
NTNNNAGGAGTCTCNTN
 A C G T A C G T A C G T A C G T A C G T C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G A C G T A C G T
A T C G C A G T A C G T G C T A C T A G C T G A A C T G A C T G C G T A A T C G A G C T G T A C G C A T T G A C T A C G G A C T G T C A

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGAGCCTTG
GGGAGGACNG
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GGGAGCCTTG
BNTGDCCTTG
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGGAGCCTTG
NGAAGC----
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GGGAGCCTTG--
--TGACCTTGAN
 C T A G C T A G A T C G G T C A A C T G A G T C A T G C C G A T A C G T A C T G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A