Information for 11-GGCGGSCMCCCTG (Motif 14)

C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G
Reverse Opposite:
A G T C C G T A A C T G A C T G T A C G C A G T T A C G A T C G A G T C A T G C A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.991e+01
Information Content per bp:1.711
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif389.0
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets45.7 +/- 23.5bp
Average Position of motif in Background51.3 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCGGSCMCCCTG
TGGCAGNCTGCCAG
 A C G T C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0052.1_Plagl1_1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCGGSCMCCCTG-
TTGGGGGCGCCCCTAG
 A C G T A C G T C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.59
Offset:9
Orientation:forward strand
Alignment:GGCGGSCMCCCTG--
---------GCTGTG
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCGGSCMCCCTG-
----RYHYACCTGB
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T
A C G T A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GGCGGSCMCCCTG--
-----NNCACCTGNN
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCGGSCMCCCTG------
----GGCCYCCTGCTGDGH
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCGGSCMCCCTG---
----SNGCACCTGCHS
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCGGSCMCCCTG
----CCTCACCTG
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G
A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:GGCGGSCMCCCTG--
------NCACCTGTN
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

Spz1/MA0111.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCGGSCMCCCTG
-GCTGTTACCCT-
 C T A G C T A G T G A C T A C G A C T G A T G C A T G C G T C A A T G C A G T C A G T C A C G T C T A G
A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T