Information for 3-TAATGAATTT (Motif 20)

A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
Reverse Opposite:
C T G A G C T A C G T A A C G T A G C T A G T C G T C A G C A T A C G T T C G A
p-value:1e-6
log p-value:-1.609e+01
Information Content per bp:1.715
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif77.2
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.0 +/- 24.0bp
Average Position of motif in Background49.2 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0068.1_Sox1_1/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TAATGAATTT---
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T A C G T A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:2
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-TAATGAATTT-----
NNNNTGAATTCANNNC
 A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PAX3/MA0780.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TAATGAATTT
TAATCGATTA
 A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
C G A T C T G A T C G A G A C T A G T C T C A G T C G A C A G T A G C T G C T A

Lhx3/MA0135.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TAATGAATTT
GATTAATTAATTT
 A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
T C A G C T G A G C A T C G A T C T G A C G T A A C G T C G A T C G T A C G T A C G A T A C G T G C A T

PAX7/MA0680.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TAATGAATTT
TAATCGATTA
 A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
C G A T C T G A C G T A G A C T A G T C T C A G C T G A A C G T A C G T G C T A

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TAATGAATTT
TAATTGATTA
 A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATTT
NNTNTCATGAATGT
 A C G T A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T

PH0088.1_Isl2/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATTT--
AAATTAATTGATTTNG
 A C G T A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T A C G T A C G T
C T G A G C T A G T C A G A C T G C A T C G T A C G T A A C G T A C G T C T A G T C G A C A G T C A G T C A G T C G A T C A T G

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----TAATGAATTT-
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PH0149.1_Pou3f4/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TAATGAATTT---
GANTTAATTAATTAANN
 A C G T A C G T A C G T A C G T A G C T T G C A C G T A A C G T T C A G T C G A C G T A A C G T C G A T A G C T A C G T A C G T A C G T
C T A G G C T A G T C A G A C T C G A T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A C G T A A C G T G A C T