Information for 7-CCACCWGGTGGCG (Motif 17)

A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
Reverse Opposite:
T G A C A T C G A G T C A G T C C T G A A T G C A G T C G C A T A C T G A C T G A C G T A C T G C T A G
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.810
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif78.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets43.2 +/- 18.2bp
Average Position of motif in Background53.9 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-CCACCWGGTGGCG------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---CCACCWGGTGGCG---
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---CCACCWGGTGGCG----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACCWGGTGGCG
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACCWGGTGGCG
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACCWGGTGGCG
CACCCCCGGGGGGG-
 A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACCWGGTGGCG
ACCACCTGTT----
 A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACCWGGTGGCG
NNCACCTGNN----
 A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCACCWGGTGGCG
--AACAGATGGC-
 A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACCWGGTGGCG
SNGCACCTGCHS---
 A C G T A C G T A G T C A G T C T G C A A G T C A G T C C G T A A C T G A T C G G A C T A C T G A C T G A T G C A C T G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T