Information for 1-GTCAGCAGAAGAGGGG (Motif 1)

A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
Reverse Opposite:
A G T C A G T C A G T C A G T C A C G T A G T C A G C T A G C T A G T C A C G T A C T G A G T C C G A T A T C G G C T A A T G C
p-value:1e-13
log p-value:-3.068e+01
Information Content per bp:1.787
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 30.6bp
Average Position of motif in Background57.8 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCAGAAGAGGGG
TGAGTCAGCA---------
 A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GTCAGCAGAAGAGGGG
GTCAGCANNTN-----
 A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GTCAGCAGAAGAGGGG
CACAGCAGGGGG----
 A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCAGCAGAAGAGGGG
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GTCAGCAGAAGAGGGG
CCACACAGCAGGAGA----
 A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTCAGCAGAAGAGGGG
CTGAGTCAGCAATTT-----
 A C G T A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----GTCAGCAGAAGAGGGG
NCTANGTCAGCAAATTT----
 A C G T A C G T A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCAGAAGAGGGG
NGTCAGCANTTT-----
 A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCAGAAGAGGGG
DCHCAGCAGGRGGCC--
 A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTCAGCAGAAGAGGGG
GAGCACAGCAGGACA----
 A C G T A C G T A C G T A T C G C G A T A T G C C G T A A C T G A G T C C G T A C T A G C T G A C T G A A C T G G T C A C T A G A C T G T A C G C T A G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T A C G T