Information for 18-AGACGTGCGGTCG (Motif 24)

C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A A G T C A G T C A C T G A G T C C G T A A G T C A C T G A C G T A G T C A C G T
p-value:1e-1
log p-value:-4.087e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets13.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGACGTGCGGTCG
RTACGTGC-----
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:AGACGTGCGGTCG
-TACGTGCV----
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGACGTGCGGTCG
GGACGTGC-----
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--AGACGTGCGGTCG
GGGTACGTGC-----
 A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AGACGTGCGGTCG-
--CAGTGTGGTCGC
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G A C G T
A C G T A C G T G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Mlxip/MA0622.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGACGTGCGGTCG
ACACGTGC-----
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGACGTGCGGTCG
NACACGTGCN----
 A C G T C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AGACGTGCGGTCG
----TTGCGGTTT
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AGACGTGCGGTCG
TAACGACACGTGC-----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGACGTGCGGTCG
-CACGTG------
 C G T A A C T G C G T A A G T C A C T G A C G T A C T G A G T C A C T G A C T G A C G T A G T C A C T G
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T