Information for 25-CTGTCTTGCAAAC (Motif 32)

A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C T G A G T C C G T A C G T A A C T G C G T A A G T C C G T A A C T G
p-value:1e-3
log p-value:-8.955e+00
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.3 +/- 36.5bp
Average Position of motif in Background62.8 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CTGTCTTGCAAAC
-NATGTTGCAA--
 A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T

PB0187.1_Tcf7_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTCTTGCAAAC--
CCGTATTATAAACAA
 A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A C G T A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTCTTGCAAAC
CTGTCTGTCACCT
 A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTCTTGCAAAC
CTGTCTGG-----
 A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTGTCTTGCAAAC
-TGTCTGDCACCT
 A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTGTCTTGCAAAC
CTTTGTTATGCAAAT
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CTGTCTTGCAAAC-
ANATTTTTGCAANTN
 A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGTCTTGCAAAC
CATTGTTATGCAAAT
 A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

PB0060.1_Smad3_1/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTCTTGCAAAC
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:10
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGTCTTGCAAAC
NNNCTTTCCAGGAAA-
 A C G T A C G T A C G T A G T C A C G T A C T G A C G T A G T C A C G T A C G T A C T G A G T C C G T A C G T A C G T A A G T C
G A C T C G A T T C A G G A T C G A C T A G C T A G C T A G T C G A T C C G T A C T A G C T A G T C G A T C G A C T G A A C G T