Information for 15-CCTAACYGAC (Motif 15)

A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C
Reverse Opposite:
A C T G C G A T G T A C C T A G A C T G C G A T A C G T C G T A C T A G A C T G
p-value:1e-9
log p-value:-2.181e+01
Information Content per bp:1.821
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif46.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.4 +/- 23.9bp
Average Position of motif in Background54.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:1
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:CCTAACYGAC
--YAACBGCC
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C
A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CCTAACYGAC-
-CCAACTGCCA
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T
A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

PB0149.1_Myb_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCTAACYGAC----
CGACCAACTGCCATGC
 A C G T A C G T A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Myb/MA0100.2/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTAACYGAC-
-CCAACTGCCA
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T
A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CCTAACYGAC-
-NHAACBGYYV
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T
A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCTAACYGAC---
CGACCAACTGCCGTG
 A C G T A C G T A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:7
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:CCTAACYGAC-
---AACCGANA
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C A C G T
A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A

Barhl1/MA0877.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCTAACYGAC
GCTAATTGCT
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C
A T C G G A T C G C A T C G T A C T G A C G A T A G C T C T A G A T G C A G C T

BARHL2/MA0635.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTAACYGAC
GCTAAACGGT
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTAACYGAC
-CTAATKGV-
 A G T C A G T C A C G T C G T A C G T A G T A C G A T C A C T G G C T A A G T C
A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C A C G T