Information for 22-ACAGAGAAAATTA (Motif 38)

C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A G T C A A C G T A C G T A C G T C G A T A G T C A C G T A G T C A C G T A C T G A C G T
p-value:1e-7
log p-value:-1.694e+01
Information Content per bp:1.933
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.0 +/- 12.1bp
Average Position of motif in Background45.7 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ACAGAGAAAATTA
GAAAGTGAAAGT--
 A C G T C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PH0024.1_Dlx5/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:ACAGAGAAAATTA----
-NANNGNTAATTACCNN
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

PH0020.1_Dlx1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ACAGAGAAAATTA--
-CTGAGGTAATTAAT
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

Dlx1/MA0879.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ACAGAGAAAATTA--
-----CCTAATTATC
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

PH0094.1_Lhx4/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ACAGAGAAAATTA-----
-CAAAGCTAATTAGNTTN
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C T G C A G C T A T G C A T A C G A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A G C T G C A T C A G T G T C A

PH0045.1_Hoxa1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACAGAGAAAATTA----
-CTGAGCTAATTACCGT
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

PRDM1/MA0508.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAGAGAAAATTA
AGAAAGTGAAAGTGA
 A C G T A C G T C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

RAX/MA0718.1/Jaspar

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:ACAGAGAAAATTA--
-----GCCAATTAAC
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C G A T C G C T A G T C A C G A T G A C T C G T A C T G A G A T C

PB0177.1_Sox7_2/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----ACAGAGAAAATTA----
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A A C G T A C G T A C G T A C G T
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACAGAGAAAATTA
-NACAGGAAAT--
 C G T A A G T C C G T A T C A G C G T A A C T G C G T A G T C A C G T A C G T A A C G T A C G T C G T A
A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T