Information for 22-CGGGTTTGAGGGAAGC (Motif 35)

A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A C G T A G T C G A T C A T G C A C G T A G T C C G T A C G T A C G T A A G T C A G T C A G T C A T C G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.8 +/- 18.7bp
Average Position of motif in Background69.4 +/- 10.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:CGGGTTTGAGGGAAGC
----------NGAAGC
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C

Stat4/MA0518.1/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC--
----TTTCCAGGAAATGG
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

STAT1/MA0137.3/Jaspar

Match Rank:3
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
----TTTCCAGGAAA-
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
-AGGTGTGA-------
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
--NNCTTCCNGGAAGN
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A T G C T C G A A G T C A G C T A C G T G T A C A G T C G C T A C T A G C A T G G T C A C T G A T C A G A G T C

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
-AGGTGTGA-------
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
---NTTTCCNGGAAA-
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T T C A G A G C T A C G T A C G T G T A C G A T C C G T A C T A G C A T G G T C A C G T A T C G A A C G T

TBX1/MA0805.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
-AGGTGTGA-------
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CGGGTTTGAGGGAAGC
------TNNGGGCAG-
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGGGTTTGAGGGAAGC
----CTTCTGGGAAA-
 A T G C C T A G A C T G C T A G A C G T A C G T A C G T A C T G C G T A A T C G C T A G A C T G G T C A C G T A A C T G A G T C
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A A C G T