Information for 1-ATGCACGTGC (Motif 1)

T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C
Reverse Opposite:
C T A G G T A C G C T A A G T C T C A G C A G T A C T G A G T C G T C A A C G T
p-value:1e-33
log p-value:-7.649e+01
Information Content per bp:1.668
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif16.62%
Number of Background Sequences with motif2145.8
Percentage of Background Sequences with motif4.52%
Average Position of motif in Targets50.0 +/- 24.5bp
Average Position of motif in Background49.4 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.91
Offset:2
Orientation:forward strand
Alignment:ATGCACGTGC--
--KCACGTGMCN
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T A C G T
A C G T A C G T C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T

MNT/MA0825.1/Jaspar

Match Rank:2
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:ATGCACGTGC-
-NGCACGTGNT
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T
A C G T C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.88
Offset:1
Orientation:forward strand
Alignment:ATGCACGTGC
-NVCACGTG-
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

Npas2/MA0626.1/Jaspar

Match Rank:4
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:ATGCACGTGC-
-NACACGTGCN
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T
A C G T A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.87
Offset:3
Orientation:reverse strand
Alignment:ATGCACGTGC-
---CACGTGNC
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T
A C G T A C G T A C G T G T A C C T G A A G T C C T A G G C A T A C T G G T C A G A T C

Arnt/MA0004.1/Jaspar

Match Rank:6
Score:0.87
Offset:3
Orientation:forward strand
Alignment:ATGCACGTGC
---CACGTG-
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C
A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:ATGCACGTGC--
--CCACGTGGNN
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

HEY1/MA0823.1/Jaspar

Match Rank:8
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:ATGCACGTGC-
-GGCACGTGTC
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T
A C G T A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.86
Offset:2
Orientation:forward strand
Alignment:ATGCACGTGC
--GCACGTGA
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C
A C G T A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A

BHLHE40/MA0464.2/Jaspar

Match Rank:10
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:ATGCACGTGC-
-GTCACGTGAN
 T G C A C A G T T C A G T G A C G T C A A G T C T C A G C G A T C A T G G A T C A C G T
A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T