Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-11 | -2.576e+01 | 0.0000 | 39.0 | 6.54% | 866.0 | 1.77% | motif file (matrix) |
svg |
2 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-9 | -2.219e+01 | 0.0000 | 56.0 | 9.40% | 1791.4 | 3.65% | motif file (matrix) |
svg |
3 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-8 | -2.043e+01 | 0.0000 | 24.0 | 4.03% | 429.6 | 0.88% | motif file (matrix) |
svg |
4 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-8 | -2.026e+01 | 0.0000 | 30.0 | 5.03% | 663.0 | 1.35% | motif file (matrix) |
svg |
5 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-8 | -1.898e+01 | 0.0000 | 36.0 | 6.04% | 964.7 | 1.97% | motif file (matrix) |
svg |
6 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.876e+01 | 0.0000 | 30.0 | 5.03% | 708.1 | 1.44% | motif file (matrix) |
svg |
7 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-7 | -1.673e+01 | 0.0000 | 74.0 | 12.42% | 3140.9 | 6.40% | motif file (matrix) |
svg |
8 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-7 | -1.616e+01 | 0.0000 | 34.0 | 5.70% | 985.7 | 2.01% | motif file (matrix) |
svg |
9 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-6 | -1.518e+01 | 0.0000 | 76.0 | 12.75% | 3392.7 | 6.92% | motif file (matrix) |
svg |
10 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-4 | -1.062e+01 | 0.0009 | 38.0 | 6.38% | 1500.3 | 3.06% | motif file (matrix) |
svg |
11 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-4 | -9.848e+00 | 0.0017 | 17.0 | 2.85% | 450.9 | 0.92% | motif file (matrix) |
svg |
12 |
| E-box(bHLH)/Promoter/Homer | 1e-4 | -9.369e+00 | 0.0026 | 7.0 | 1.17% | 83.6 | 0.17% | motif file (matrix) |
svg |
13 |
| PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-4 | -9.311e+00 | 0.0026 | 26.0 | 4.36% | 922.3 | 1.88% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-4 | -9.298e+00 | 0.0026 | 21.0 | 3.52% | 664.4 | 1.35% | motif file (matrix) |
svg |
15 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -9.207e+00 | 0.0026 | 59.0 | 9.90% | 2907.1 | 5.93% | motif file (matrix) |
svg |
16 |
| SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer | 1e-2 | -6.614e+00 | 0.0305 | 15.0 | 2.52% | 495.4 | 1.01% | motif file (matrix) |
svg |
17 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-2 | -6.551e+00 | 0.0306 | 37.0 | 6.21% | 1788.6 | 3.65% | motif file (matrix) |
svg |
18 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -6.510e+00 | 0.0306 | 49.0 | 8.22% | 2572.3 | 5.24% | motif file (matrix) |
svg |
19 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -6.497e+00 | 0.0306 | 8.0 | 1.34% | 174.5 | 0.36% | motif file (matrix) |
svg |
20 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-2 | -6.451e+00 | 0.0306 | 41.0 | 6.88% | 2055.6 | 4.19% | motif file (matrix) |
svg |
21 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -6.407e+00 | 0.0306 | 41.0 | 6.88% | 2060.1 | 4.20% | motif file (matrix) |
svg |
22 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -6.233e+00 | 0.0325 | 59.0 | 9.90% | 3285.1 | 6.70% | motif file (matrix) |
svg |
23 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.925e+00 | 0.0423 | 34.0 | 5.70% | 1664.2 | 3.39% | motif file (matrix) |
svg |
24 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.898e+00 | 0.0423 | 6.0 | 1.01% | 112.8 | 0.23% | motif file (matrix) |
svg |
25 |
| ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer | 1e-2 | -5.604e+00 | 0.0536 | 6.0 | 1.01% | 120.0 | 0.24% | motif file (matrix) |
svg |
26 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -5.129e+00 | 0.0829 | 9.0 | 1.51% | 266.3 | 0.54% | motif file (matrix) |
svg |
27 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.088e+00 | 0.0832 | 26.0 | 4.36% | 1245.7 | 2.54% | motif file (matrix) |
svg |
28 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -4.835e+00 | 0.1033 | 12.0 | 2.01% | 436.0 | 0.89% | motif file (matrix) |
svg |
29 |
| CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.764e+00 | 0.1071 | 36.0 | 6.04% | 1934.3 | 3.94% | motif file (matrix) |
svg |