Information for 6-TTGTGAAMTRTATGAA (Motif 9)

A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T C G A T A G T C C G T A A G C T C G T A A G T C C G T A A C T G A G C T C G A T A G T C C G T A T A G C C G T A C T G A
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.2 +/- 29.4bp
Average Position of motif in Background45.3 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Vdr/MA0693.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA---
---TGAACTCNATGAACTC
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T C A G T G C A T G C A G A T C A G C T A G T C C T G A C T G A G A C T T C A G T G C A T G C A G T A C A G C T A G T C

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGAAMTRTATGAA
NATTGTGCAAT-------
 A C G T A C G T A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA-------
------NTTNTATGAATGTGNNC
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:TTGTGAAMTRTATGAA----
----ACTATGAATGAATGAT
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA----
NNNTGAACTCNNTGACCTCN
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

FOXH1/MA0479.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA
-TGTGGATTNNN----
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA
TTATGCAAT-------
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
C G A T C A G T C T G A A G C T C T A G G A T C T G C A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TTGTGAAMTRTATGAA
CCTTTGATGT-------
 A C G T A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA--
---TGAACCCGATGACCC
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

PB0178.1_Sox8_2/Jaspar

Match Rank:10
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:TTGTGAAMTRTATGAA
-NNTNTCATGAATGT-
 A G C T A C G T A C T G A C G T A C T G G C T A C T G A G T A C A C G T C T A G C G A T C T G A A C G T A C T G C G T A C G T A
A C G T A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T