Information for 3-CWCACWCTGGYAW (Motif 3)

A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
Reverse Opposite:
C G A T C G A T C T G A A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C T G C G T A A C T G
p-value:1e-12
log p-value:-2.893e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.01%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.0 +/- 6.6bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0195.1_Zbtb3_2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CWCACWCTGGYAW---
CAATCACTGGCAGAAT
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A A C G T A C G T A C G T
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CWCACWCTGGYAW
---GGTCTGGCAT
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CWCACWCTGGYAW
AGCGGCACACACGCAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CWCACWCTGGYAW
GGCCACACCCAN----
 A C G T A C G T A C G T A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.54
Offset:6
Orientation:forward strand
Alignment:CWCACWCTGGYAW
------TTGGCA-
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CWCACWCTGGYAW
GGCCACACCCA-----
 A C G T A C G T A C G T A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CWCACWCTGGYAW-
-----NTTGGCANN
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CWCACWCTGGYAW
-----CTTGGCAA
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CWCACWCTGGYAW
VRAACAATGG---
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CWCACWCTGGYAW
--AACAAAGG---
 A G T C C G A T T A G C C G T A A G T C C G A T A G T C A C G T A C T G A C T G A G C T C G T A C G T A
A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T