Information for 2-CMCWGYCACGTGM (Motif 2)

A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
Reverse Opposite:
A C G T A G T C C G T A G A T C C T A G A C G T A C T G C T G A T G A C G C A T A T C G A C G T A T C G
p-value:1e-15
log p-value:-3.483e+01
Information Content per bp:1.687
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.36%
Number of Background Sequences with motif131.6
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets55.0 +/- 28.7bp
Average Position of motif in Background48.8 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.83
Offset:4
Orientation:forward strand
Alignment:CMCWGYCACGTGM
----GNCACGTG-
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.83
Offset:4
Orientation:forward strand
Alignment:CMCWGYCACGTGM-
----KCCACGTGAC
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A A C G T
A C G T A C G T A C G T A C G T A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.83
Offset:4
Orientation:forward strand
Alignment:CMCWGYCACGTGM
----GHCACGTG-
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.81
Offset:3
Orientation:forward strand
Alignment:CMCWGYCACGTGM
---GGTCACGTGA
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A

TFEB/MA0692.1/Jaspar

Match Rank:5
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:CMCWGYCACGTGM-
----GTCACGTGAT
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.81
Offset:3
Orientation:reverse strand
Alignment:CMCWGYCACGTGM
---NGKCACGTGM
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C

Id2/MA0617.1/Jaspar

Match Rank:7
Score:0.81
Offset:5
Orientation:reverse strand
Alignment:CMCWGYCACGTGM
-----TCACGTGC
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

TFE3/MA0831.1/Jaspar

Match Rank:8
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:CMCWGYCACGTGM-
----GTCACGTGNT
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A A C G T
A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T

TFEC/MA0871.1/Jaspar

Match Rank:9
Score:0.81
Offset:4
Orientation:reverse strand
Alignment:CMCWGYCACGTGM-
----NTCACGTGAT
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T

Mlxip/MA0622.1/Jaspar

Match Rank:10
Score:0.81
Offset:5
Orientation:reverse strand
Alignment:CMCWGYCACGTGM
-----ACACGTGC
 A T G C G T C A A T G C C G T A A C T G G A C T A G T C G T C A A G T C C T A G A C G T C T A G T G C A
A C G T A C G T A C G T A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C