p-value: | 1e-8 |
log p-value: | -2.000e+01 |
Information Content per bp: | 1.664 |
Number of Target Sequences with motif | 14.0 |
Percentage of Target Sequences with motif | 2.35% |
Number of Background Sequences with motif | 134.3 |
Percentage of Background Sequences with motif | 0.27% |
Average Position of motif in Targets | 39.0 +/- 20.1bp |
Average Position of motif in Background | 46.4 +/- 27.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0070.1_Sox30_1/Jaspar
Match Rank: | 1 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | CAAWGAACACTGC---- -AATGAACAATGGAATT |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 2 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAWGAACACTGC--- TTTAGAACAATAAAAT |
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PB0183.1_Sry_2/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -CAAWGAACACTGC--- TCACGGAACAATAGGTG |
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PB0194.1_Zbtb12_2/Jaspar
Match Rank: | 4 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----CAAWGAACACTGC TATCATTAGAACGCT-- |
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PB0063.1_Sox13_1/Jaspar
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAWGAACACTGC--- TTAAGAACAATAAATT |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAAWGAACACTGC NTTNAGAACAATTA |
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PB0099.1_Zfp691_1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAAWGAACACTGC--- NNNNTGAGCACTGTNNG |
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PB0173.1_Sox21_2/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CAAWGAACACTGC--- NNNNNGAACAATTGANN |
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Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | CAAWGAACACTGC- ----GAACAATGGN |
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AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | CAAWGAACACTGC CCAGGAACAG--- |
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