Information for 1-CGGAAATACCCGA (Motif 1)

A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G A T C G C G A T C G T A A G C T A G C T A G C T G T A C A G T C A C T G
p-value:1e-20
log p-value:-4.634e+01
Information Content per bp:1.778
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.2 +/- 23.4bp
Average Position of motif in Background31.9 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGGAAATACCCGA
-GGAAATCCCC--
 A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CGGAAATACCCGA
-GGAAATTCCC--
 A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGGAAATACCCGA
-GGAAATTCCC--
 A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGAAATACCCGA
-GGAAANCCCC--
 A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATACCCGA
RCCGGAARYN-----
 A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATACCCGA
RCCGGAAGTD-----
 A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T A C G T A C G T A C G T A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATACCCGA
DCCGGAARYN-----
 A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATACCCGA
NNTGGAAANN-----
 A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

ETV2/MA0762.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CGGAAATACCCGA
AACCGGAAATA-----
 A C G T A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
C T G A T C G A T A G C T G A C A C T G A C T G C G T A G C T A T C G A A G C T C T G A A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGGAAATACCCGA
AATGGAAAAT-----
 A C G T A C G T A G T C A C T G A C T G C T G A C T G A C T G A G C A T C G T A A T G C G T A C G T A C A C T G C G T A
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T