Information for 6-GAACTATTGT (Motif 9)

T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T
Reverse Opposite:
G C T A T G A C G T C A C T G A G C A T C T G A A C T G A G C T A C G T A G T C
p-value:1e-10
log p-value:-2.506e+01
Information Content per bp:1.682
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif249.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets59.3 +/- 25.7bp
Average Position of motif in Background49.4 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAACTATTGT-----
NNNCCATTGTGTNAN
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

SOX9/MA0077.1/Jaspar

Match Rank:2
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GAACTATTGT--
---CCATTGTTC
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAACTATTGT--
--NCCATTGTTY
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GAACTATTGT-------
CNNNTATTGTTCNNNNN
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:GAACTATTGT-
---CCWTTGTY
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PB0073.1_Sox7_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----GAACTATTGT--------
TNNANNTCTATTGTTNTNNANN
 A C G T A C G T A C G T A C G T T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T T C A G C G T A C G T A C T G A C G A T C G A T A G T C G A C T C G T A A G C T C G A T T C A G C G A T G A C T G A T C G C A T C G A T G A C T T G C A C G A T C A G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAACTATTGT---
---CCATTGTTYB
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GAACTATTGT---
---CCATTGTTNY
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T

PB0074.1_Sox8_1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACTATTGT------
GTATCTATTGTTCTTTA
 A C G T T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GAACTATTGT-
--CTCATTGTC
 T C A G T G C A T C G A T G A C G A C T C G T A G A C T A C G T A C T G C G A T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C