Information for 5-GTGRARGRCAAACCCC (Motif 8)

A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G A C T G C T A G A C G T A C G T A C G T A T C G A G T C A G T C G A T C A C G T A G C T A G T C G T C A A G T C
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.888
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.1 +/- 21.4bp
Average Position of motif in Background59.3 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC-
-----GGACACACCCCC
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC
------GGAAATCCCC
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC-
-----GGGAAATCCCCN
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC-
----AGGGGAATCCCCT
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGRARGRCAAACCCC
----GGGGGAATCCCC
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGRARGRCAAACCCC-
----AGGGGAATCCCCT
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC
------GGAAANCCCC
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTGRARGRCAAACCCC
AGGTGHCAGACA------
 A C G T A C G T A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC-
-----GGCCACACCCAN
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:GTGRARGRCAAACCCC
------GGAAATTCCC
 A C T G A C G T A C T G T C A G G T C A C T A G A C T G C T A G A T G C C G T A C G T A C G T A A G T C A G T C A G T C A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C