Information for 4-CCGCCGGAGG (Motif 2)

A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G
Reverse Opposite:
A G T C A G T C A C G T A G T C G A T C A T C G T C A G A G T C T A C G A C T G
p-value:1e-25
log p-value:-5.783e+01
Information Content per bp:1.823
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.13%
Number of Background Sequences with motif296.7
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets46.3 +/- 26.0bp
Average Position of motif in Background49.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CCGCCGGAGG--
-NGCCTGAGGCN
 A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGGAGG----
ATTGCCTGAGGCAAT
 A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCGCCGGAGG--
-AGCCTCAGGCA
 A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CCGCCGGAGG--
-TGCCTGAGGCN
 A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGAGG---
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCGCCGGAGG---
CCCCCCCGGGGGGGT
 A C G T A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCGCCGGAGG--
CCCCCCCGGGGGNN
 A C G T A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T
T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCGGAGG----
ANTGCCTGAGGCAAN
 A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGCCGGAGG----
--SCCTSAGGSCAW
 A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCGCCGGAGG----
ATTGCCTGAGGCGAA
 A C G T A G T C A T G C T C A G A G T C A T G C C T A G A C T G T G C A A C T G C T A G A C G T A C G T A C G T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A