Information for 5-ACAGGCAGGCTCTTCC (Motif 9)

C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
Reverse Opposite:
A C T G A T C G C G T A C T G A C T A G C T G A A C T G G T A C A G T C C G A T A C T G A T G C A G T C A C G T A C T G A G C T
p-value:1e-13
log p-value:-3.003e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.0 +/- 20.9bp
Average Position of motif in Background38.3 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCAGGCTCTTCC
AACAGGAAGT-------
 A C G T C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACAGGCAGGCTCTTCC
CACAGN-----------
 A C G T C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----ACAGGCAGGCTCTTCC
AGCAACAGCCGCACC-----
 A C G T A C G T A C G T A C G T C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:ACAGGCAGGCTCTTCC
ACAGGAAGTG------
 C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACAGGCAGGCTCTTCC
CCAGACAG--------
 C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACAGGCAGGCTCTTCC
SCAGYCADGCATGAC-
 C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCAGGCTCTTCC
AACCGGAAGT-------
 A C G T C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:forward strand
Alignment:ACAGGCAGGCTCTTCC
ACAGGAAGTG------
 C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:ACAGGCAGGCTCTTCC
CCAGACRSVB------
 C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ACAGGCAGGCTCTTCC
NACAGGAAAT-------
 A C G T C T G A A G T C C G T A A C T G A T C G A G T C C G T A A C T G C A T G A G T C A G C T A G T C A G C T C G A T A T G C G T A C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T