Information for 22-TCYCYMCCAACAR (Motif 34)

A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
Reverse Opposite:
A G C T A C G T C T A G A C G T C G A T A C T G A C T G A C G T C T G A A C T G C T A G A C T G C G T A
p-value:1e-8
log p-value:-1.855e+01
Information Content per bp:1.864
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif49.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.0 +/- 24.8bp
Average Position of motif in Background47.2 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCYCYMCCAACAR
ANNTNCCCACCCANNAC
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TCYCYMCCAACAR
-SCCTAGCAACAG
 A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

ZNF740/MA0753.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCYCYMCCAACAR
-CCCCCCCCAC--
 A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
A C G T T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:4
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:TCYCYMCCAACAR-
--------AACAAT
 A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

E2F7/MA0758.1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCYCYMCCAACAR
TTTTCCCGCCAAAA-
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----TCYCYMCCAACAR-----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

E2F8/MA0865.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCYCYMCCAACAR
TTTCCCGCCAAA---
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
G A C T A G C T A C G T A G T C A G T C A T G C T A C G A G T C T A G C C T G A C G T A G C T A A C G T A C G T A C G T

PB0100.1_Zfp740_1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TCYCYMCCAACAR-
CCCCCCCCCCCACTTG
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A A C G T
A G T C T A G C A G T C T A G C T G A C G T A C G T A C G A T C G A T C G T A C G T A C G T C A G T A C G C A T G A C T A T C G

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCYCYMCCAACAR
NCTTCCCGCCC-----
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCYCYMCCAACAR
TTTCCCGCCMAV---
 A C G T A C G T A C G T A G T C A G T C A G T C A G C T G T C A A G T C A G T C C G T A C G T A A G T C C G T A C T G A
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T A C G T