Information for 19-AMAAATRGRAAWYCAS (Motif 33)

C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G C T A G C G T A C G A T A C G T A G T C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
p-value:1e-8
log p-value:-1.873e+01
Information Content per bp:1.847
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 23.7bp
Average Position of motif in Background32.7 +/- 3.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2C/MA0497.1/Jaspar

Match Rank:1
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AMAAATRGRAAWYCAS
ATGCTAAAAATAGAA------
 A C G T A C G T A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AMAAATRGRAAWYCAS
---NATGGAAAAN---
 C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
A C G T A C G T A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:AMAAATRGRAAWYCAS
---AATGGAAAAT---
 C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AMAAATRGRAAWYCAS
DCYAAAAATAGM-------
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AMAAATRGRAAWYCAS
CCAAAAATAG--------
 A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AMAAATRGRAAWYCAS
CAAAATCGAAACTAA-
 C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AMAAATRGRAAWYCAS
GCTAAAAATAGC-------
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AMAAATRGRAAWYCAS
KCCAAAAATAGC-------
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AMAAATRGRAAWYCAS
TCTAAAAATAGA-------
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AMAAATRGRAAWYCAS
ACTATAAATAGA-------
 A C G T A C G T A C G T C G T A G T C A C G T A G T C A G T C A A C G T C T A G A C T G C T A G C G T A C G T A C G A T A G T C A G T C C G T A A T G C
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T