Information for 19-GAAACACAGTTAA (Motif 28)

A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
Reverse Opposite:
A G C T C G A T C G T A C G T A G T A C A C G T C A T G A C G T A C T G A C G T A C G T A C G T A G T C
p-value:1e-8
log p-value:-2.015e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.0 +/- 22.2bp
Average Position of motif in Background56.3 +/- 20.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0006.1_Barhl2/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAACACAGTTAA---
AAAAACCAATTAAGAA
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GAAACACAGTTAA
CAAAAGTAAACAAAG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAAACACAGTTAA
TWGHWACAWTGTWDC
 A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GAAACACAGTTAA--
GHTACAWTGTADCHR
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A A C G T A C G T
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

MYBL1/MA0776.1/Jaspar

Match Rank:5
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GAAACACAGTTAA----
-----ACCGTTAACGGT
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T G A C T A G C T C A G G A C T G C A T C G T A T C G A G T A C A T C G C A T G G A C T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAAACACAGTTAA
AAAGTAAACAAAAATT-
 A C G T A C G T A C G T A C G T A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GAAACACAGTTAA
NAAACCACAG----
 A C G T A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GAAACACAGTTAA
AAACCACAGC---
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GAAACACAGTTAA---
CAAAACCAATTAATTT
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

PB0066.1_Sox17_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAAACACAGTTAA---
-ATAAACAATTAAACA
 A C T G C G T A C G T A C G T A A G T C C G T A G A T C C G T A A C T G A C G T A C G T C G T A C T G A A C G T A C G T A C G T
A C G T T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A