Information for 16-GGTTTGCCACTTC (Motif 25)

A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C
Reverse Opposite:
A T C G C G T A C G T A A C T G A C G T A C T G A T C G G T A C G T C A C G T A C T G A A G T C A G T C
p-value:1e-9
log p-value:-2.198e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.3 +/- 12.4bp
Average Position of motif in Background59.8 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:forward strand
Alignment:GGTTTGCCACTTC--
-----ACCACTTGAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.63
Offset:6
Orientation:forward strand
Alignment:GGTTTGCCACTTC--
------CCACTTGAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGTTTGCCACTTC-
-----ACCACTTAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGTTTGCCACTTC-
-----ACCACTTAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

PH0111.1_Nkx2-2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GGTTTGCCACTTC------
--ATAACCACTTGAAAATT
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGTTTGCCACTTC
--CTTGGCAA---
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGTTTGCCACTTC-
----MRSCACTYAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GGTTTGCCACTTC
-GTTGCGCAAT--
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C
A C G T T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGTTTGCCACTTC-
------GCACTTAA
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGTTTGCCACTTC-----
--TAAGCCACTTGAATTT
 A C T G A C T G A G C T A C G T A C G T A C T G A T G C A G T C C G T A G T A C A C G T A C G T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T