Information for 12-TCCAAGCAGGGCTTBG (Motif 17)

C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
Reverse Opposite:
A G T C T C G A C G T A C T G A C T A G A T G C A T G C G A T C A G C T A C T G A T G C A G C T C A G T A C T G A T C G G C T A
p-value:1e-10
log p-value:-2.504e+01
Information Content per bp:1.715
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif35.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets54.2 +/- 24.3bp
Average Position of motif in Background52.0 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TCCAAGCAGGGCTTBG
TTTCCCAGAAN-------
 A C G T A C G T C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TCCAAGCAGGGCTTBG
-GGGGCCGAGGCCTG-
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCCAAGCAGGGCTTBG
TCCCAGMCRAGCCCC-
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCCAAGCAGGGCTTBG
CCACACAGCAGGAGA---
 A C G T A C G T C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCCAAGCAGGGCTTBG
DCTCAGCAGG------
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TCCAAGCAGGGCTTBG
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.51
Offset:8
Orientation:forward strand
Alignment:TCCAAGCAGGGCTTBG
--------AGGCCTAG
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TCCAAGCAGGGCTTBG
-CACAGCAGGGGG---
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TCCAAGCAGGGCTTBG
CCACACAGCAGGAGA---
 A C G T A C G T C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCCAAGCAGGGCTTBG
DCHCAGCAGGRGGCC-
 C A G T A T G C A G T C G T C A C T G A A T C G G T A C T C G A C T A G A T C G A T C G A G T C A G C T G C A T A C G T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T